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Registro Completo |
Biblioteca(s): |
Embrapa Soja. |
Data corrente: |
18/06/2012 |
Data da última atualização: |
23/07/2012 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
SOARES-CAVALCANTI, N. M.; BELARMINO, L. C.; KIDO, E. A.; PANDOLFI, V.; MARCELINO-GUIMARÃES, F. C.; RODRIGUES, F. A.; PEREIRA, G. A. G.; BENKO-ISEPPON, A. M. |
Afiliação: |
NINA M. SOARES-CAVALCANTI, UFPE; LUÍS C. BELARMINO, UFPE; EDERSON A. KIDO, UFPE; VALESCA PANDOLFI, UFPE; FRANCISMAR CORREA MARCELINO, CNPSO; FABIANA A. RODRIGUES, CNPSo; GONÇALO A. G. PEREIRA, UNICAMP; ANA M. BENKO-ISEPPON, UFPE. |
Título: |
Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula. |
Ano de publicação: |
2012 |
Fonte/Imprenta: |
Genetics and Molecular Biology, Ribeirão Preto, v. 35, n. 1, suppl., p. 247-259, May 2012. |
Idioma: |
Inglês |
Conteúdo: |
Heat shock (HS) leads to the activation of molecular mechanisms, known as HS-response, that prevent damage and enhance survival under stress. Plants have a flexible and specialized network of Heat Shock Factors (HSFs), which are transcription factors that induce the expression of heat shock proteins. The present work aimed to identify and characterize the Glycine max HSF repertory in the Soybean Genome Project (GENOSOJA platform), comparing them with other legumes (Medicago truncatula and Lotus japonicus) in view of current knowledge of Arabidopsis thaliana. The HSF characterization in leguminous plants led to the identification of 25, 19 and 21 candidate ESTs in soybean, Lotus and Medicago, respectively. A search in the SuperSAGE libraries revealed 68 tags distributed in seven HSF gene types. From the total number of obtained tags, more than 70% were related to root tissues (water deficit stress libraries vs. controls), indicating their role in abiotic stress responses, since the root is the first tissue to sense and respond to abiotic stress. Moreover, as heat stress is related to the pressure of dryness, a higher HSF expression was expected at the water deficit libraries. On the other hand, expressive HSF candidates were obtained from the library inoculated with Asian Soybean Rust, inferring crosstalk among genes associated with abiotic and biotic stresses. Evolutionary relationships among sequences were consistent with different HSF classes and subclasses. Expression profiling indicated that regulation of specific genes is associated with the stage of plant development and also with stimuli from other abiotic stresses pointing to the maintenance of HSF expression at a basal level in soybean, favoring its activation under heat-stress conditions. MenosHeat shock (HS) leads to the activation of molecular mechanisms, known as HS-response, that prevent damage and enhance survival under stress. Plants have a flexible and specialized network of Heat Shock Factors (HSFs), which are transcription factors that induce the expression of heat shock proteins. The present work aimed to identify and characterize the Glycine max HSF repertory in the Soybean Genome Project (GENOSOJA platform), comparing them with other legumes (Medicago truncatula and Lotus japonicus) in view of current knowledge of Arabidopsis thaliana. The HSF characterization in leguminous plants led to the identification of 25, 19 and 21 candidate ESTs in soybean, Lotus and Medicago, respectively. A search in the SuperSAGE libraries revealed 68 tags distributed in seven HSF gene types. From the total number of obtained tags, more than 70% were related to root tissues (water deficit stress libraries vs. controls), indicating their role in abiotic stress responses, since the root is the first tissue to sense and respond to abiotic stress. Moreover, as heat stress is related to the pressure of dryness, a higher HSF expression was expected at the water deficit libraries. On the other hand, expressive HSF candidates were obtained from the library inoculated with Asian Soybean Rust, inferring crosstalk among genes associated with abiotic and biotic stresses. Evolutionary relationships among sequences were consistent with different HSF classes and subclasses. Expression pro... Mostrar Tudo |
Palavras-Chave: |
Bioinformática. |
Thesagro: |
Gene; Genoma; Soja. |
Thesaurus Nal: |
Abiotic stress; Bioinformatics; Genes; Genome; Soybeans; Transcription factors. |
Categoria do assunto: |
S Ciências Biológicas |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/61075/1/gmb.overall.v35n1s.247-259.2012.pdf
|
Marc: |
LEADER 02713naa a2200325 a 4500 001 1926601 005 2012-07-23 008 2012 bl uuuu u00u1 u #d 100 1 $aSOARES-CAVALCANTI, N. M. 245 $aOverall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula. 260 $c2012 520 $aHeat shock (HS) leads to the activation of molecular mechanisms, known as HS-response, that prevent damage and enhance survival under stress. Plants have a flexible and specialized network of Heat Shock Factors (HSFs), which are transcription factors that induce the expression of heat shock proteins. The present work aimed to identify and characterize the Glycine max HSF repertory in the Soybean Genome Project (GENOSOJA platform), comparing them with other legumes (Medicago truncatula and Lotus japonicus) in view of current knowledge of Arabidopsis thaliana. The HSF characterization in leguminous plants led to the identification of 25, 19 and 21 candidate ESTs in soybean, Lotus and Medicago, respectively. A search in the SuperSAGE libraries revealed 68 tags distributed in seven HSF gene types. From the total number of obtained tags, more than 70% were related to root tissues (water deficit stress libraries vs. controls), indicating their role in abiotic stress responses, since the root is the first tissue to sense and respond to abiotic stress. Moreover, as heat stress is related to the pressure of dryness, a higher HSF expression was expected at the water deficit libraries. On the other hand, expressive HSF candidates were obtained from the library inoculated with Asian Soybean Rust, inferring crosstalk among genes associated with abiotic and biotic stresses. Evolutionary relationships among sequences were consistent with different HSF classes and subclasses. Expression profiling indicated that regulation of specific genes is associated with the stage of plant development and also with stimuli from other abiotic stresses pointing to the maintenance of HSF expression at a basal level in soybean, favoring its activation under heat-stress conditions. 650 $aAbiotic stress 650 $aBioinformatics 650 $aGenes 650 $aGenome 650 $aSoybeans 650 $aTranscription factors 650 $aGene 650 $aGenoma 650 $aSoja 653 $aBioinformática 700 1 $aBELARMINO, L. C. 700 1 $aKIDO, E. A. 700 1 $aPANDOLFI, V. 700 1 $aMARCELINO-GUIMARÃES, F. C. 700 1 $aRODRIGUES, F. A. 700 1 $aPEREIRA, G. A. G. 700 1 $aBENKO-ISEPPON, A. M. 773 $tGenetics and Molecular Biology, Ribeirão Preto$gv. 35, n. 1, suppl., p. 247-259, May 2012.
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Registro original: |
Embrapa Soja (CNPSO) |
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Registros recuperados : 58 | |
5. | | SILVA, M. L. da; QUEIROZ, M. A. de; FERREIRA, M. A. J. F.; BENKO-ISEPPON, A. M. Caracterização molecular por ISSR de acessos de melancia do Banco Ativo de Germoplasma de Cucurbitáceas. Horticultura Brasileira, v. 30, n. 2, p. S4445-S4451, jul. 2012. 1 CD-R0M. Suplemento. Edição dos Anais do 52 Congresso Brasileiro de Olericultura, Salvador, jul. 2012.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Semiárido. |
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6. | | VASCONCELOS, S.; SOUZA, A. A. de; GUSMÃO, C. L. S.; MILANI, M.; BENKO-ISEPPON, A. M.; BRASILEIRO-VIDAL, A. C. Heterochromatin and rDNA 5S and 45S sites as reliable cytogenetic markers for castor bean (Ricinus communis, euphorbiaceae). Micron, n. 41, p. 746-753, 2010.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
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7. | | ONOFRE, A. V. C.; AMORIM, L. L. B.; SITTOLIN, I. M.; ROCHA, M. de M.; ANDRADE, G. P.; PIO-RIBEIRO, G.; KIDO, E. A.; BENKO-ISEPPON, A. M. Bulked segregant analysis for identification of DAF markers linked to resistance to CPSMV in cowpea. Tropical Plant Pathology, v. 34, p. S162, ago. 2009. Suplemento. Ref. 562. Edição dos Resumos do 42° Congresso Brasileiro de Fitopatologia, Rio de Janeiro, ago. 2009.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Meio-Norte. |
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8. | | LIMA, B. E. de A.; SILVA, J. S. da; BARBOZA, J.; MELO, N. F. de; BENKO-ISEPPON, A. M.; SILVA, R. L. de O. Caracterização estrutura da família gênica GRAS em Vitis spp. inoculadas com Xanthomona citri. In: CURSO DE VERÃO EM GENÉTICA, 4., 2021, Goiânia. Anais... Goiânia: Universidade Federal de Goiás, 2021.Tipo: Resumo em Anais de Congresso |
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9. | | OLIVEIRA, M. F. de; SILVA, R. L. de O.; BEZERRA NETO, J. P.; ARAÚJO, A, C. C. de; MELO, N. F. de; BENKO-ISEPPON, A. M. Caracterização estrutural de peptídeos antimicrobianos da classe cistatina em acessos de videira inoculados com Xanthomonas citri pv. viticola. In: ENCONTRO DE GENÉTICA DO NORDESTE, 22., 2018, Natal. Anais... Natal: UFRN: Sociedade Brasileira de Genética Regional Nordeste, 2018. p. 201.Tipo: Resumo em Anais de Congresso |
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10. | | BORTOLETI, K. C. A.; ABDELNOOR, R. V.; BENKO-ISEPPON, A. M.; BELARMINO, L. C. S.; OLIVEIRA, A. R. S.; NASCIMENTO, I. R.; BRASILEIRO-VIDAL, A. C. Distribuição de microssatélites no genoma de leguminosas mediante hibridização in situ fluorescente. In: CONGRESSO BRASILEIRO DE GENÉTICA, 56., 2010, Guarujá. Resumos... [Curitiba]: UFPR, 2010. p. 115.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Soja. |
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11. | | KIDO, E. A.; PANDOLFI, V.; HOULLOU-KIDO, L. M.; ANDRADE, F. C.; MARCELINO, F. C.; NEPOMUCENO, A. L.; ABDELNOOR, R. V.; BURNQUIST, W. L.; BENKO-ISEPPON, A. M. Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review. Current Protein & Peptide Science, v. 11, n. 3, p. 220-230, May 2010.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
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12. | | SOARES-CAVALCANTI, N. M.; BELARMINO, L. C.; KIDO, E. A.; PANDOLFI, V.; MARCELINO-GUIMARÃES, F. C.; RODRIGUES, F. A.; PEREIRA, G. A. G.; BENKO-ISEPPON, A. M. Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula. Genetics and Molecular Biology, Ribeirão Preto, v. 35, n. 1, suppl., p. 247-259, May 2012.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
Biblioteca(s): Embrapa Soja. |
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13. | | KIDO, E. A.; FERREIRA-NETO, J. R. C.; BINNECK, E.; SILVA, M. da; SILVA JUNIOR, W. da; BENKO-ISEPPON, A. M. Explore the RNA-sequencing and the next-generation sequencing in crops responding to abiotic stress. In: SHARMA, P.; YADAV, D.; GAUR, R. K. (ed.). Bioinformatics in Agriculture: Next Generation Sequencing Era. [S. l.]: Elsevier Academic Press, c2022. CHAP. 10, p. 161-175.Tipo: Capítulo em Livro Técnico-Científico |
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14. | | SODRZEIESKI, P. A.; FERREIRA-NETO, J. R. C.; ABURJAILE, F. F.; MARCELINO-GUIMARÃES, F. C.; SILVA, C. A. S.; BENKO-ISEPPON, A. M. Genome sequencing of soybean (Glycine max) access resistant to asian soybean rust (Phakopsora pachyrhizi). In: BRAZILIAN CONGRESS OF GENETICS, 68., 2023, Ouro Preto, MG. Paleogenomics sequencing ancient DNA. Ribeirão Preto: Sociedade Brasileira de Genética, 2023. e-book. p. 421.Tipo: Resumo em Anais de Congresso |
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16. | | BELARMINO, L. C.; OLIVEIRA, A. R. da S.; BRASILEIRO-VIDAL, A. C.; BORTOLETI, K. C. de A.; BEZERRA-NETO, J. P.; ABDELNOOR, R. V.; BENKO-ISEPPON, A. M. Mining plant genome browsers as a means for efficient connection of physical, genetic and cytogenetic mapping: an example using soybean. Genetics and Molecular Biology, Ribeirão Preto, v. 35, n. 1, suppl., p. 335-347, May 2012.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
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18. | | FERREIRA-NETO, J. R. C.; SILVA, M. D. da; BENKO-ISEPPON, A. M.; PANDOLFI, V.; BINNECK, E.; NEPOMUCENO, A. L.; ABDELNOOR, R. V.; KIDO, E. A. Inositol phosphates and Raffinose family oligosaccharides pathways: Structural genomics and transcriptomics in soybean under root dehydration Plant Gene, v. 20, 100202, 2019. 13 p.Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 2 |
Biblioteca(s): Embrapa Soja. |
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19. | | SILVA, J. B.; SILVA, R. L. de O.; BARROS, A. A. G. de; ABURJAILE, F. F.; MELO, N. F. de; BENKO-ISEPPON, A. M. Receptor-like proteins (RLPs) in the transcriptome of Vitis spp. under inoculation of Xanthomonas citri. In: BRAZILIAN CONGRESS OF GENETICS, 66.; SIMPÓSIO DE CITOGENÉTICA E GENÉTICAS DE PEIXES, 19.; REUNIÃO DE GENÉTICA DE MICRORGANISMOS, 32.; CONGRESSO LATINO-AMERICANO DE GENÉTICA PARA CONSERVAÇÃO, 2., 2021, Ribeirão Preto. Abstracts. Ribeirão Preto: SBG, 2021. p. 590.Tipo: Resumo em Anais de Congresso |
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20. | | LIMA, A. T. B.; DAMASCENO-SILVA, K. J.; ROCHA, M. M.; BENKO-ISEPPON, A. M.; KIDO, E. A.; AMORIM, L. L. B.; ONOFRE, A. V. C. Seleção de primers visando identificação de marcas DAF associados a QTL'S em feijão-caupi. In: CONGRESSO NACIONAL DE FEIJÃO-CAUPI, 2., 2009, Belém, PA. Da agricultura de subsistência ao agronegócio: anais. Belém, PA: Embrapa Amazônia Oriental, 2009. p. 831-835. 1 CD-ROM. Autoria: DAMASCENO-SILVA, K. J. [i.e. SILVA, K. J. D. e]Tipo: Artigo em Anais de Congresso / Nota Técnica |
Biblioteca(s): Embrapa Meio-Norte. |
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Registros recuperados : 58 | |
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